Publication 2018

 

(a) Developmental and Evolutionary Genomics

  1. Luo, Y.J., Kanda, M., Koyanagi, R., Hisata, K., Akiyama, T., Sakamoto, H., Sakamoto, T., Satoh, N.
    Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads.
    Nature Ecology & Evolution 2, 141–151 (2018), doi:10.1038/s41559-017-0389-y.
  2. Inoue, J., Satoh, N.
    Deuterostome Genomics: Lineage-specific Protein Expansions that Enabled Chordate Muscle Evolution
    Molecular Biology and Evolution. 35(4):914-924. (2018)
  3. Gerdol, M., Luo, Y.J., Satoh, N., Pallavicini, A.
    Genetic and molecular basis of the immune system in the brachiopod Lingula anatina
    Developmental and Comparative Immunology. 82: 7-30. (2018)
  4. Tominaga, H., Satoh, N., Ueno, N., Takahashi, H.
    Enhancer activities of amphioxus Brachyury genes in embryos of the ascidian, Ciona intestinalis.
    genesis in press. (2018)

 

(b) Enviromental Genomics

  1. Zayasu, Y., Satoh, N., Shinzato, C.
    Genetic diversity of farmed and wild populations of the reef building coral, Acropora tenuis. 
    Restoration Ecology. doi: 10.1111/rec.12687 (2018)
  2. Shinzato, C., Zayasu, Y., Kanda, M., Kawamitsu, M., Satoh, N., Yamashita, H., Go Suzuki, G.
    Using seawater to document coral-zoothanthella diversity: A new approach to coral reef monitoring using environmental DNA
    Front. Mar. Sci. doi: 10.3389/fmars.2018.00028 (2018) 
  3. Guzman, C., Han, X., Shoguchi, E., Nic Chormaic, S.
    Fluorescence from a single Symbiodinium cell.
    Methods Appl Fluoresc. doi: 10.1088/2050-6120/aaba89. (2018)
  4. Guzman, C., Shinzato, C., Lu, T.M., Conaco, C.
    Transcriptome analysis of the reef-building octocoral, Heliopora coerulea
    Scientific Reports 8:8397. DOI:10.1038/s41598-018-26718-5 (2018) 
  5. Hamada, M., Schröder, K., Bathia, J., Kürn, U., Fraune, S., Khalturina, M., Khalturin, K., Shinzato, C., Satoh, N., Bosch, T.C.G
    Metabolic co-dependence drives the evolutionary ancient Hydra-Chlorella symbiosis
    eLife, in press; doi: https://doi.org/10.1101/234757 (2018)
  6. Mohamed, A., Cumbo, V., Harii, S., Shinzato, C., Chan, C.X., Ragan, M., Satoh, N., Ball, E., Miller, D.
    Deciphering the nature of the coral-Chromera association.
    The ISME Journal. 12(3):776-790 (2018) 
  7. Shoguchi, E., Beedessee, G., Tada, I., Hisata, K., Kawashima, T., Takeuchi, T., Arakaki, N., Fujie, M., Koyanagi, R., Roy, M.C., Kawachi, M., Hidaka, M., Satoh, N., Shinzato, C.
    Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
    BMC Genomics in press. (2018)
  8. Higa, Y., Shinzato, C., Zayasu, Y., Nagata, T., Nakamura, R., Yokokura, A., Shanado, S., Ohmori M.
    Flexible development of techniques for coral reef restoration using asexual reproduction in the Coral Reef Preservation and Rehabilitation Project by Okinawa Prefectural Government, Japan (in Japanese)
    Journal of the Japanese Coral Reef Society, 20: 21-37 (2018)

 

(c) Functional Genomics

  1. Kawahara, T., Izumikawa, M., Kozone, I., Hashimoto, J., Kagaya, N.,Koiwai, H., Komatsu, M., Fujie, M., Sato, N., Ikeda, H., Shin-ya, K.
    Neothioviridamide, a Polythioamide Compound Produced by Heterologous Expression of a Streptomyces sp. Cryptic RiPP Biosynthetic Gene Cluster
    J. Nat. Prod. 81(2):264-269. (2018) 
  2. Iwasaka, H., Koyanagi, R., Satoh, R., Nagano, A., Watanabe, K., Hisata, K., Satoh, N., Aki, T.
    A Possible Trifunctional β-Carotene Synthase Gene Identified in the Draft Genome of Aurantiochytrium sp. Strain KH105.
    Genes. 9(4), 200 (2018)  
  3. Tsutsumi, H., Katsuyama, Y., Izumikawa, M., Takagi, M., Fujie, M., Satoh, N., Shin-ya, K., Ohnishi, Y.
    Unprecedented Cyclization Catalyzed by a Cytochrome P450 in Benzastatin Biosynthesis
    JACS 140(21):6631-6639. (2018) 
  4. Takeuchi, T., , Plasseraud, L., Ziegler-Devin, I., Brosse, N., Shinzato, C., Satoh, N., Marin, F.
    Biochemical characterization of the skeletal matrix of the massive coral, Porites australiensis - The saccharide moieties and their localization
    Journal of Structural Biology. in press (2018)