2024
Developmental and Evolutionary
- Takahashi, H., Hisata, K., Iguchi, R., Kikuchi, S., Ogasawara, M., Satoh, N.
scRNA-seq analysis of cells comprising the amphioxus notochord
Developmental Biology 508:24–37 (2024) - Makabe, K.W., Jensen, H.I., Fodor, A.C.A., Hsu, J., Jeffery, W.R., Satoh, N., and Swalla, B.J.
Cymric, a Maternal and Zygotic HTK-16-Like SHARK Family Tyrosine Kinase Gene, Is Disrupted in Molgula occulta, a Tailless Ascidian
The Biological Bulletin, 245:1-8 (2024)
Enviromental Genomics
- Nishitsuji, K., Nagahama, S., Narisoko, H., Shimada, K., Okada, N., Shimizu, Y., Satoh, N.
Possible monitoring of mesophotic scleractinian corals using an underwater mini-ROV to sample coral eDNA
R. Soc. Open Sci. 11: 221586. - Açıkbaş, A.H.O., Narisoko, H., Huerlimann, R., Nishitsuji, K., Satoh, N., Reimer, J.D., Ravasi, T.
Fish and coral assemblages of a highly isolated oceanic island: The first eDNA survey of the Ogasawara Islands
Environmental DNA. 2024;6:e509 https://doi.org/10.1002/edn3.509 - Shikina, S., Yoshioka, Y., Chiu, Y.L., Uchida, T., Chen, E., Cheng, Y.C., Lin, T.C., Chu, Y.L., Kanda, M., Kawamitsu, M., Fujie, M., Takeuchi, T., Zayasu, Y., Satoh, N., Shinzato, C.
Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp.
Commun Biol. 7(1):899. doi: 10.1038/s42003-024-06544-4. (2024) - Yoshioka, Y., Yamashita, H., Uchida, T., Shinzato, C., Kawamitsu, M., Fourreau, C.J.L., Castelló, G.M., Fiedler, B.K., van den Eeckhout, T.M., Borghi, S., Reimer, J.D., Shoguchi, E.
Azooxanthellate Palythoa (Cnidaria: Anthozoa) Genomes Reveal Toxin-related Gene Clusters and Loss of Neuronal Genes in Hexacorals
Genome Biol Evol, 16(9):evae197. doi: 10.1093/gbe/evae197.(2024) - Kawamura, K. and Satoh, N.
Embryonic development of the gastrodermis in the coral Acropora tenuis
Zoological Science, 41(6) https://doi.org/10.2108/zs240032 - Yoshioka, Y., Nagata, F., Nonaka, M., Satoh, N.
Molecular phylogenetic position of the family Fungiidae (Cnidaria: Anthozoa) based on complete mitochondrial genome sequences
Galaxea, 26:43-7. (2024) https://doi.org/10.3755/galaxea.G26N-7 - Satoh, N. Sinniger, F., Narisoko, H., Nagahama, S., Okada, N., Shimizu, Y., Yoshioka, Y., Hisata, K., Harii, S.
Using underwater mini-ROV for coral eDNA survey: a case study in Okinawan mesophotic ecosystems.
Coral Reefs. (2024)
Functional genomics
- Shoguchi, E., Kawachi, M., Shinzato, C. & Beedessee, G.
Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies.
Environmental Microbiology Reports, 16(2), e13238. Available from: https://doi.org/10.1111/1758-2229.13238
Genome Collaborative Research
- Kudo, K., Nishimura, T., Izumikawa, M., Kozone, I., Hashimoto, J., Fujie, M., Suenaga, H., Ikeda, H., Satoh, N., Shin-ya, K.
Capability of a large bacterial artificial chromosome clone harboring multiple biosynthetic gene clusters for the production of diverse compounds.
J Antibiot (2024). https://doi.org/10.1038/s41429-024-00711-9