2024

Developmental and Evolutionary

  1. Takahashi, H., Hisata, K., Iguchi, R., Kikuchi, S., Ogasawara, M., Satoh, N.
    scRNA-seq analysis of cells comprising the amphioxus notochord
    Developmental Biology 508:24–37 (2024)  
  2. Makabe, K.W., Jensen, H.I., Fodor, A.C.A., Hsu, J., Jeffery, W.R., Satoh, N., and Swalla, B.J.
    Cymric, a Maternal and Zygotic HTK-16-Like SHARK Family Tyrosine Kinase Gene, Is Disrupted in Molgula occulta, a Tailless Ascidian
    The Biological Bulletin, 245:1-8 (2024) 

 

Enviromental Genomics

  1. Nishitsuji, K., Nagahama, S., Narisoko, H., Shimada, K., Okada, N., Shimizu, Y., Satoh, N.
    Possible monitoring of mesophotic scleractinian corals using an underwater mini-ROV to sample coral eDNA
    R. Soc. Open Sci. 11: 221586.
  2. Açıkbaş, A.H.O., Narisoko, H., Huerlimann, R., Nishitsuji, K., Satoh, N., Reimer, J.D., Ravasi, T.
    Fish and coral assemblages of a highly isolated oceanic island: The first eDNA survey of the Ogasawara Islands
    Environmental DNA. 2024;6:e509 https://doi.org/10.1002/edn3.509
  3. Shikina, S., Yoshioka, Y., Chiu, Y.L., Uchida, T., Chen, E., Cheng, Y.C., Lin, T.C., Chu, Y.L., Kanda, M., Kawamitsu, M., Fujie, M., Takeuchi, T., Zayasu, Y., Satoh, N., Shinzato, C.
    Genome and tissue-specific transcriptomes of the large-polyp coral, Fimbriaphyllia (Euphyllia) ancora: a recipe for a coral polyp.
    Commun Biol. 7(1):899. doi: 10.1038/s42003-024-06544-4. (2024)

 

Functional genomics

  1. Shoguchi, E., Kawachi, M., Shinzato, C. & Beedessee, G.
    Functional analyses of bacterial genomes found in Symbiodiniaceae genome assemblies.
    Environmental Microbiology Reports, 16(2), e13238. Available from: https://doi.org/10.1111/1758-2229.13238

Genome Collaborative Research

  1. Kudo, K., Nishimura, T., Izumikawa, M., Kozone, I., Hashimoto, J., Fujie, M., Suenaga, H., Ikeda, H., Satoh, N., Shin-ya, K.
    Capability of a large bacterial artificial chromosome clone harboring multiple biosynthetic gene clusters for the production of diverse compounds.
    J Antibiot (2024). https://doi.org/10.1038/s41429-024-00711-9