[Seminar] "Standalone Simulator and Cloud Service for Multilevel Physiological Model Simulations" - Prof. Asai, Yamaguchi University

Integrated Open Systems Unit would like to invite you to the seminar by Professor Yoshiyuki Asai.

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Date: Tuesday, November 22nd, 2016

Time: 3:00-4:00p.m.

Venue: Lab3 C700

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Speaker

Yoshiyuki Asai, Ph.D.

Professor, Yamaguchi University

Title 

Standalone Simulator and Cloud Service for Multilevel Physiological Model Simulations

Abstract

Recently the roles of mathematical modeling and simulations of multilevel hierarchical physiological systems became increasingly important. Physiological Hierarchy Markup Language (PHML) has been developed following pioneering efforts in the area of physiome and systems biology, such as SBML (Systems Biology Markup Language) and CellML. PHML has a capability to integrate SBML model in a PHML model to implement multilevel physiological systems from subcellular level to physiological level such as tissue and organ. Flint is a standalone simulator supporting PHML, SBML and PHML-SBML hybridized models. It is now opensource software at GitHub. Using the computation engine of Flint, there is also a cloud based simulation service Flint K3, which works on a computer cluster for better computational scalability. We will introduce relevant technologies for multilevel modeling and simulations including Flint and Flint K3.