Past Events
Towards holistic insect monitoring by accelerating species discovery, description, and identification using robots, nanopore sequencing, and Artificial Intelligence
2024-11-05Seminar by Prof. Rudolf Meier from Humboldt Universitat zu Berlin
https://www.museumfuernaturkunde.berlin/en/user/2072
Abstract:
Biodiversity science often overlooks hyperdiverse insect clades, despite their critical ecosystem services. To illustrate this, I show that over half of the flying insect diversity in many samples is concentrated within 20 family-level clades, regardless of sampling location. By comparing species richness in bulk samples with the number of described species, I highlight how little is known about these clades, leading to the conclusion that new approaches to species discovery and the taxonomy of “dark taxa” are essential. At the Center for Integrative Biodiversity Discovery at the Natural History Museum Berlin, we envision a future where specimen handling and imaging are largely automated, specimens are sorted into putative species using nanopore barcodes, and species descriptions combine molecular and morphological data in a semi-automated process. I will demonstrate how this approach can transform a "dark taxon" like fungus gnats in the Mycetophilidae family from largely unknown in regions like Singapore to sufficiently well-documented for biomonitoring. Finally, I will discuss how images of common species could then be used to use train AI algorithms for a future where many specimens will be identified by images only.
Seminar by Evolutionary Genomics Unit: Mature larvae continue calling at night in Vespa mandarinia
2024-07-16Speaker: Dr. Haruna Fujioka, Assistant Professor of Okayama University
岡山大学 藤岡春菜 助教授 (個人HP)
社会性昆虫、 昆虫生態学、動物行動学、時間生物学
Vespa hornet larvae produce a rhythmic 'rasping' sound by rubbing their mandibles against the cell wall of the nest. The call is thought to be a larval provisioning cue. However, detailed observation of larval calls has been limited to a few species, and it is not known whether the call can be influenced by the external environment or internal larval states such as hunger. We conducted laboratory observations of larval calls to investigate the effect of 1) larval stage, 2) daily variation, and 3) larval hunger level. Vespa mandarinia larvae produced sounds independent of light conditions, time of day, worker absence, and hunger level. A key finding of this research is the novel discovery that larvae produce sounds at night, a previously undocumented behavior.
Insights into the onset of African Miombo woodlands & Exploring diversification tempos and evolutionary histories from African rain to montane forests
2023-11-06Zoom link: https://oist.zoom.us/j/98425990760?pwd=VUlWc1F5ei9Qc0pyQzVtQ3p1OTV1Zz09
Meeting ID: 984 2599 0760, Password: 590538
Title 1: Insights into the onset of African Miombo woodlands: Phylogenomics of the keystone genus Brachystegia (Fabaceae, Detarioideae) by Dr. Arthur F. Boom
from Royal Museum for Central Africa (Biology Department, Section Vertebrates, Tervuren, Belgium)
Title 2: Exploring diversification tempos and evolutionary histories from African rain to montane forests by Dr. Jérémy MIGLIORE from Muséum départemental du Var, Toulon(FRANCE)
Functional heterogeneity: relationship between group performance and individual behavioural differences
2023-08-17By Prof. Isaac Planas-Sitjà from Department of Biological Sciences, Tokyo Metropolitan University (https://www.researchgate.net/profile/Isaac-Planas)
Zoom Link:
https://oist.zoom.us/j/95993904953?pwd=MEZpZk1uVGxJQUxGZnpyOEoxbVVKUT09
Meeting ID: 959 9390 4953
Passcode: 782775
Abstruct:
Animals face daily decisions, such as where to forage or nest, which can be critical for their fitness. In social animals, these decisions are complicated by a potential conflict of interests among group members, which nonetheless must collectively reach some form of agreement if the group is to remain together. Insects have been model organisms to study collective behaviour and advance our understanding of mechanisms leading to optimal and successful decisions. While it is clear that there are no two identical individuals, a debate still exists on whether heterogeneity of behaviour among group members could improve, or not, group performance. In fact, the question of how identical or dissimilar units, with same average properties, give rise to different collective processes goes beyond behavioural ecology. During this talk, I will introduce some of the mechanisms involved in collective behaviour (e.g., information sharing, social feedback and social interactions), and discuss how these mechanisms coupled with individual differences can lead to more accurate decisions, from gregarious to eusocial insects.
Seminar: From alpine beetle populations to Cretaceous moth radiation: can we connect the dots between microevolution and macroevolution?
2023-06-12Abstract
Population genetics and phylogenetics are two main subfields of evolutionary genetics. The former investigates the genetic variations among populations within a species while the latter focuses on reconstructing phylogeny of many species using genetic data. In this presentation, I will present my previous work on the population genetics of an alpine ground beetle, Nebria ingens complex, in the Sierra Nevada in California and my current work on the deep evolutionary history of species radiation of Lepidoptera. In the alpine ground beetle study, I used genome-wide variants to characterize the population structure and demographic history. I found that the glacial refugia was in the low-elevation drainage basins of Sierra Nevada during the last glacial maximum, followed by the postglacial recolonization to the current high-altitude alpine zone. I also used genome-wide association approaches to identify the genes putatively associated with the postglacial elevational range shift, local adaptation to the heterogeneous environments, and the morphological variations. For the study of Lepidoptera species radiation, I use published high-quality lepidopteran genomes to explore the genomic evidence related to rapid diversification of modern lepidopteran lineages. The preliminary results suggest that the gene evolution involving host plant detection, phytocompound detoxification, and protein digestion play crucial roles in species diversification along with the Angiosperm radiation. Finally, I will provide my personal perspective on connecting population genetics (microevolution) and phylogenetics (macroevolution) for a more thorough understanding of evolutionary processes.
About Dr. Yi-Ming Weng:
Yi-Ming was born and brought up in Taiwan. He graduated from National Chung-Hsing University for bachelor’s and master’s degrees in Entomology department. He is interested in insect biodiversity and evolution in general. For his master thesis, he studied phylogeography of alpine ground beetles in Taiwan, looking for sharing evolutionary history between the alpine ground beetle species with similar ecological niche and geographical distribution. Yi-Ming started his PhD carrier in the University of Wisconsin-Madison in 2017. He worked with Professor Sean Schoville to further study the evolutionary history of alpine ground beetle from the Sierra Nevada in California using genomic data. By the time he started to develop his skillsets in bioinformatics and genomics. Now Yi-Ming is working with Professor Akito Kawahara in the University of Florida as a postdoctoral researcher studying evolutionary genomics of Lepidoptera.
Despite Yi-Ming has been working mostly with computers for his bioinformatics analyses, he is most interested in outdoor activities and direct observation of insects. He believes that good biological questions usually come from the field, and stepping out to touch the insects gets the best inspiration.
Seminar: Cichlid fishes as a model for evolution of altruism in vertebrates
2023-05-29We are inviting Dr. Shun Satoh from Kyoto University who calls himself as a "Fish Maniac" in his blog.For his details please check the link below. https://symphysodondiscus.wixsite.com/website-1/blank-3
Date: May 29th(Mon)
Time: 15:00* -
Room: C209 (Center Bldg)
*The start time has been updated as of May 19th. sorry for the inconvenience.
Zoom Link:
https://oist.zoom.us/j/94360778822?pwd=ZDlPZFY2d3luQWovcUdLZ1lvbGdpQT09
Meeting ID: 943 6077 8822
Passcode: 705537
If you have any questions, please contact egu@oist.jp.
OIST Mini Symposium "Phylogeny and Classification of Termites"
2022-11-29 to 2022-12-01This mini-symposium will allow the leading researchers on termite phylogeny and evolution to present their latest results. It will help determine the gaps in our understanding, and design approaches to fill them. In particular, this mini-symposium will provide a platform for researchers to determine the necessary steps to take to create a new termite classification, that takes into account phylogenetic evidences.
Evolutionary Genomics Seminar Vol.1_Mysterious mating behavior of a subsocial wood-feeding cockroach: female and male eat their wings one another, presented by Haruka Osaki, Postdoc at Kyoto University
2022-08-05Seminar by Haruka Osaki, Postdoc at Kyoto University
Date: August 5th
Time: 3pm - (30-40 mins Lecture and 10-20mins QA session)
Zoom: Meeting:
https://us04web.zoom.us/j/
For questions please contact: egu@oist.jp
Japan Eco-Evo English Seminar #9: Gall-forming aphids, small insects with great power: female-biased sex allocation via female competition induces novel insect gall organogenesis in plants
2022-05-20The seminar aims to initiate interactions between international and Japanese researchers and students in the field of Ecology and Evolution. The 9th event is presented by Dr. Xin Tong, SPDR Fellow of Cell Function Research Team at RIKEN CSRS.
Title:
Gall-forming aphids, small insects with great power: female-biased sex allocation via female competition induces novel insect gall organogenesis in plants
Timeline
15:00~15:30: seminar
15:30~16:00: questions and discussion
16:00~: mixer
Please apply from here: https://sites.google.com/view/jee-english-seminar
Japan Eco-Evo English Seminar #8: Individual-based temporal beta-diversity: Individual turnover and compositional shift in a community
2022-04-15The seminar aims to initiate interactions between international and Japanese researchers and students in the field of Ecology and Evolution. The 8th event is presented by Ryosuke Nakadai from National Institute for Environmental Studies.
Please register from the next link: https://sites.google.com/view/jee-english-seminar
Title:
Individual-based temporal beta-diversity: Individual turnover and compositional shift in a community
Timeline
15:00~15:30: seminar
15:30~16:00: questions and discussion
16:00~: mixer
Abstract:
As increasing the necessity to assess the influences of global climate change and anthropogenic disturbances on biodiversity, the concept of beta-diversity has been extended to a temporal context and has been intensively studied in recent years. In studies of temporal beta-diversity, methodologies used in spatial beta-diversity have often been used simply. However, temporal beta-diversity often includes "the same individual" between two communities implicitly, which has not been the case with spatial communities, so it is necessary to consider the effects of individual turnover and persistence for quantifying temporal beta-diversity. I focused on both individual identity and the persistence of individuals within a temporal beta-diversity framework and developed some novel indices. In my presentation, I will explain the novel indices which I recently developed and the concepts behind them, showing examples of analysis. I would also like to discuss the prospects for community assemblages through both time and individual identity.